The detailed information of tRNA gene sequence


Sequence ID>W1511609368
Genome IDLCFE01000033
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_43_11 GW2011_GWC1_43_11 [LCFE]
Start position on genome 1008
End posion on genome 1097
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgaggcttt
tRNA gene sequence 
GGAGGAGTCGCATAGTTTGGTCCATTGCGGGAGTTTGCTAAATTCCTGAGCTGAATAAGC
TCGCGTGAGTTCGAATCTCACCTCCTCCGCag
Downstream region at tRNA end position 
tggaagctac
Secondary structure (Cloverleaf model)
>W1511609368	Ser	GCT
                   t      GCag tggaagctac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
    T T G A        C      | | | | |     G
  T         T A C G       G T G A G     C
  G           | | |                 T T
  G         T T G C
    T C C A        G     TGAGCTGAATAAGCTCGC
                    G - C
                    G - C
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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