The detailed information of tRNA gene sequence


Sequence ID>W1511609372
Genome IDLCFE01000033
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_43_11 GW2011_GWC1_43_11 [LCFE]
Start position on genome 1534
End posion on genome 1445
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtctgactt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGTTCGCTTGGAGAGCGAATGCCGCCGCAAGGTGG
CCGGGAGTTCGAATCTCCCCCTCTCCGCAA
Downstream region at tRNA end position 
actatactct
Secondary structure (Cloverleaf model)
>W1511609372	Ser	GGA
                   t      GCAA actatactct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGCCGCCGCAAGGTGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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