The detailed information of tRNA gene sequence


Sequence ID>W1511609447
Genome IDLCFG01000041
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_43_11b GW2011_GWC1_43_11b [LCFG]
Start position on genome 6147
End posion on genome 6058
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtggaagttt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGCACGCTTGGAAAGCGTGTGAGGTGTCAAAGCCT
CCGAGGGTTCGAATCCCTCTCTCTCCGCCT
Downstream region at tRNA end position 
tcgcctcgca
Secondary structure (Cloverleaf model)
>W1511609447	Ser	GGA
                   t      GCCT tcgcctcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGAGGTGTCAAAGCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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