The detailed information of tRNA gene sequence


Sequence ID>W1511609829
Genome IDLCFS01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Nomurabacteria bacterium GW2011_GWA2_43_15 bacterium GW2011_GWA2_43_15 [LCFS]
Start position on genome 102357
End posion on genome 102270
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taagggttac
tRNA gene sequence 
GGAGGCGTCGCATAGCGGTCTAGTGCACCATCTTGGAAAGGTGGCAGGCCTGAAAGGGCC
TCGAGAGTTCAAATCTCTCCGCCTCCGCat
Downstream region at tRNA end position 
caaatcggaa
Secondary structure (Cloverleaf model)
>W1511609829	Ser	GGA
                   c      GCat caaatcggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | | | | |     A
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAGGCCTGAAAGGGCCTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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