The detailed information of tRNA gene sequence


Sequence ID>W1511609911
Genome IDLCFU01000030
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_43_17 GW2011_GWA2_43_17 [LCFU]
Start position on genome 14215
End posion on genome 14288
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaaaattgt
tRNA gene sequence 
GGGGGTGTCGTTCAGTGGTAGGACTCCGGTCTCCAAAACCGGTAACGTGGGTTCGATTCC
TATCCCCCCTGCCA
Downstream region at tRNA end position 
gcccgaaggg
Secondary structure (Cloverleaf model)
>W1511609911	Trp	CCA
                   t      GCCA gcccgaaggg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T   C
                     G - C          T T
                    T     T A T C C     A
        G A        C      + | + | |     G
      T     C T T G       G T G G G     C
      G     | + | |                 T T
      G     G G A C
        T A        T     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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