The detailed information of tRNA gene sequence


Sequence ID>W1511609930
Genome IDLCFV01000004
Search identical group
Phylum/ClassUnclassified
Speciescandidate division TM6 bacterium GW2011_GWF2_43_17 [LCFV]
Start position on genome 42624
End posion on genome 42531
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaaatgcatc
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGTTGAAAGAGCACGATTGGAAATCGTGTATGTCCTGATTAAGG
GGCATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
agtttggaag
Secondary structure (Cloverleaf model)
>W1511609930	Ser	GGA
                   c      ACCA agtttggaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         | | |                 T T
    T       A A G A
      T G A        G     TATGTCCTGATTAAGGGGCATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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