The detailed information of tRNA gene sequence


Sequence ID>W1511609966
Genome IDLCFW01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium GW2011_GWF2_43_17 GW2011_GWF2_43_17 [LCFW]
Start position on genome 2278
End posion on genome 2204
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatcctccat
tRNA gene sequence 
AGGGGCATAGTGTCAATGGTAGCACGTTGGTCTCCAAAACCAAAAGTTCGGGTTCGAACC
CTGGTGCCCCTGCCA
Downstream region at tRNA end position 
aaagattttt
Secondary structure (Cloverleaf model)
>W1511609966	Trp	CCA
                   t      GCCA aaagattttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          C A
                    T     G G T C C     A
      A A C        A      + | + | |     G
    T       T G T G       T C G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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