The detailed information of tRNA gene sequence


Sequence ID>W1511610439
Genome IDLCGK01000008
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_43_30 GW2011_GWC1_43_30 [LCGK]
Start position on genome 34695
End posion on genome 34610
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttagattcc
tRNA gene sequence 
GGAGGCGTCGCATAGTGGTCTAGTGCGCACGCTTGGAAAGCGTGTAGGGCGCAAGTCCTC
GAGAGTTCGACTCTCTCCGCCTCCGCtt
Downstream region at tRNA end position 
ttttggtttg
Secondary structure (Cloverleaf model)
>W1511610439	Ser	GGA
                   c      GCtt ttttggtttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAGGGCGCAAGTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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