The detailed information of tRNA gene sequence


Sequence ID>W1511610962
Genome IDLCHB01000047
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_43_9b GW2011_GWA2_43_9b [LCHB]
Start position on genome 1213
End posion on genome 1123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgattttca
tRNA gene sequence 
GGAGAGGTGCGCCGAATGGCAAGGCAGCAGTTTGCTAAACTGTATCCCGCTAGAAACGGG
ATTGCGGGTTCGAGTCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ggttcggagg
Secondary structure (Cloverleaf model)
>W1511610962	Ser	GCT
                   a      GCCA ggttcggagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C G C C C     A
      A A G        G      | | | | |     G
    T       C C G C       G C G G G     C
    G         |                     T T
    G       A G G C
      C A          A     ATCCCGCTAGAAACGGGATT
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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