The detailed information of tRNA gene sequence


Sequence ID>W1511611108
Genome IDLCHG01000033
Search identical group
Phylum/ClassUnclassified
SpeciesMicrogenomates group bacterium GW2011_GWC1_44_10 GW2011_GWC1_44_10 [LCHG]
Start position on genome 4169
End posion on genome 4082
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
tctccgccaa
tRNA gene sequence 
GGAGGGGTCGCATAGCGGTCGAGTGCTCCGGTTTACTAAACCGGCGTATCGCAAGATACC
GCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
tttcgaagaa
Secondary structure (Cloverleaf model)
>W1511611108	Ser	ACT
                   a      GCCA tttcgaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    T       G T G C
      C G A        T     CGTATCGCAAGATACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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