The detailed information of tRNA gene sequence


Sequence ID>W1511611278
Genome IDLCHM01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Gottesmanbacteria bacterium GW2011_GWB1_44_11c bacterium GW2011_GWB1_44_11c [LCHM]
Start position on genome 2350
End posion on genome 2262
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catccatatt
tRNA gene sequence 
GGAGGGTTGGCTGAGCGGTCCAAAGCGATGGGTTGCTAACCCATTGAGCCCACAAAGGCT
CGCACAGGTTCAAATCCTGTACCCTCCGCat
Downstream region at tRNA end position 
cgatatttct
Secondary structure (Cloverleaf model)
>W1511611278	Ser	GCT
                   t      GCat cgatatttct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    G       G T C G       A C A G G     C
    G         | | |                 T T
    T       A A G C
      C C A        G     TGAGCCCACAAAGGCTCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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