The detailed information of tRNA gene sequence


Sequence ID>W1511611323
Genome IDLCHN01000028
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA1_44_12 bacterium GW2011_GWA1_44_12 [LCHN]
Start position on genome 2371
End posion on genome 2285
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaaatgctt
tRNA gene sequence 
GGAGGCGTCGCCTAGTGGCCGATGGCAGCGGGTTGCTAACCCGCGTCCCTAAAGGACACG
TGGGTTCGAATCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
tttatcaata
Secondary structure (Cloverleaf model)
>W1511611323	Ser	GCT
                   t      GCCA tttatcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G T G G G     C
    G         | | |                 T T
    C       T G G C
      C G A        A     GTCCCTAAAGGACAC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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