The detailed information of tRNA gene sequence


Sequence ID>W1511611457
Genome IDLCHR01000017
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA1_44_13 GW2011_GWA1_44_13 [LCHR]
Start position on genome 21326
End posion on genome 21237
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaataatct
tRNA gene sequence 
GGAGACGTGGCTGAGTGGCCGAAGGCACCTCACTGCTAACGAGGCAGGGTAGCAATACTC
TCATGAGTTCGAATCTCATCGTCTCCGCAA
Downstream region at tRNA end position 
cccaaaatat
Secondary structure (Cloverleaf model)
>W1511611457	Ser	GCT
                   t      GCAA cccaaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G A G     C
    G         + | |                 T T
    C       A G G C
      C G A        A     CAGGGTAGCAATACTCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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