The detailed information of tRNA gene sequence


Sequence ID>W1511611544
Genome IDLCHU01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWA2_44_13b bacterium GW2011_GWA2_44_13b [LCHU]
Start position on genome 10510
End posion on genome 10585
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttttatcttt
tRNA gene sequence 
GCCCTCGTAGCTCAATGGACAGAGCAAGACGCTTCTATCGTCGAGGTTGGAGGTTCGACC
CCTCCCGAGTGCACCG
Downstream region at tRNA end position 
cgagagttgg
Secondary structure (Cloverleaf model)
>W1511611544	Arg	TCT
                   t      ACCG cgagagttgg
                     G - C
                     C - G
                     C   T
                     C - G
                     T - A
                     C - G
                     G - C          C C
                    T     C C T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     AGGTT
                    A   G
                    G - C
                    A - T
                    C - G
                    G - C
                  C       T
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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