The detailed information of tRNA gene sequence


Sequence ID>W1511611558
Genome IDLCHV01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA2_44_13 bacterium GW2011_GWA2_44_13 [LCHV]
Start position on genome 45617
End posion on genome 45704
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
ttgctcactt
tRNA gene sequence 
GGAGGGGTCACATAGTGGTCTAGTGTAGAGGTTTACTAAACCTCCGTATCGCAAGATACC
GCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
atatcagata
Secondary structure (Cloverleaf model)
>W1511611558	Ser	ACT
                   t      GCCA atatcagata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C A       G C G G G     C
    G       + | | |                 T T
    T       G T G T
      C T A        A     CGTATCGCAAGATACC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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