The detailed information of tRNA gene sequence


Sequence ID>W1511613125
Genome IDLCJW01000054
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA2_44_99 bacterium GW2011_GWA2_44_99 [LCJW]
Start position on genome 3766
End posion on genome 3851
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagcttgtac
tRNA gene sequence 
GGAGGAATCGCCTAGTGGCTATGGCACAGCATTGGAAATGCTGCGAGCGCAAGCTCTCGT
GGGTTCGAGTCCCGCTTCCTCCGCCA
Downstream region at tRNA end position 
aatggaagat
Secondary structure (Cloverleaf model)
>W1511613125	Ser	GGA
                   c      GCCA aatggaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     C G C C C     A
      T G A        C      | + | | |     G
    G       T C C G       G T G G G     C
    G         | | |                 T T
    C       T G G C
      T A          A     CGAGCGCAAGCTCTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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