The detailed information of tRNA gene sequence


Sequence ID>W11149124
Genome IDAEUJ01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPseudodesulfovibrio mercurii ND132 [AEUJ]
Start position on genome 698862
End posion on genome 698955
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaaatttgc
tRNA gene sequence 
GGAAGCGTTTCGGCACCGGTGTGTCGCTTGGTCTTCAAAACCAATGTGTGGCAGTGATGT
CACGGGCAGGTTCGACTCCTGTACGCTTCCGCCA
Downstream region at tRNA end position 
accgaactca
Secondary structure (Cloverleaf model)
>W11149124	SeC(p)	TCA
                   c      GCCA accgaactca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T G T C C     A
      C C A        T      + | | | |     G
    G       C G G C       G C A G G     C
    G       | + | |                 T T
    T       G T C G
      G T          C     TGTGTGGCAGTGATGTCACGG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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