The detailed information of tRNA gene sequence


Sequence ID>W1511613347
Genome IDLCKF01000008
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWA2_45_13 bacterium GW2011_GWA2_45_13 [LCKF]
Start position on genome 12467
End posion on genome 12556
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtctgctttt
tRNA gene sequence 
GGAGGGGTCGCATAGTGGTCTAGTGCGCAGTCCTGGAAAGACTGTATGTCAGAAATGGCA
TCGAGGGTTCAAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
aaaaacgaaa
Secondary structure (Cloverleaf model)
>W1511613347	Ser	GGA
                   t      GCCA aaaaacgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATGTCAGAAATGGCATC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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