The detailed information of tRNA gene sequence


Sequence ID>W1511613348
Genome IDLCKF01000010
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWA2_45_13 bacterium GW2011_GWA2_45_13 [LCKF]
Start position on genome 9898
End posion on genome 9824
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcttccgttg
tRNA gene sequence 
GGGGATGTCGTTCAATTGGTAGGACAGCGGTCTCCAAAACCGCCGATTCAGGTTCAAGTC
CTGGCATCCCCGCCT
Downstream region at tRNA end position 
tcgcctcgcc
Secondary structure (Cloverleaf model)
>W1511613348	Trp	CCA
                   g      GCCT tcgcctcgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     G G T C C     A
      T A A        C      + | | | |     A
    T       C T T G       T C A G G     C
    G       | + | |                 T T
    G       G G A C
      T A          A     CGAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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