The detailed information of tRNA gene sequence


Sequence ID>W1511613417
Genome IDLCKH01000010
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_45_14 GW2011_GWA2_45_14 [LCKH]
Start position on genome 41525
End posion on genome 41614
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgctgacgtt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGACTAGTGCACCGGTCTTGAAAACCGGAGTCCGTTCACACGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>W1511613417	Ser	TGA
                   t      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        A     AGTCCGTTCACACGGACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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