The detailed information of tRNA gene sequence


Sequence ID>W1511613447
Genome IDLCKI01000008
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_45_14 GW2011_GWC1_45_14 [LCKI]
Start position on genome 5499
End posion on genome 5575
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaatatac
tRNA gene sequence 
AGCGGGGTGGAGCAGTCCGGCAGCTCGCGTGGCTCATAACCACGAGGTCACAGGTTCGAA
TCCTGTCCCCGCAACAA
Downstream region at tRNA end position 
gttgtgcttt
Secondary structure (Cloverleaf model)
>W1511613447	Met	CAT
                   c      ACAA gttgtgcttt
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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