The detailed information of tRNA gene sequence


Sequence ID>W1511613451
Genome IDLCKI01000008
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_45_14 GW2011_GWC1_45_14 [LCKI]
Start position on genome 31920
End posion on genome 31831
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaataaatac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCACCTCACTGCTAACGAGGCAGGGTTTAACCGCCC
TCGCGAGTTCGAATCTCGCCCTCTCCGCAA
Downstream region at tRNA end position 
aaagaaaaaa
Secondary structure (Cloverleaf model)
>W1511613451	Ser	GCT
                   c      GCAA aaagaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G A G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CAGGGTTTAACCGCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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