The detailed information of tRNA gene sequence


Sequence ID>W1511613458
Genome IDLCKI01000009
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWC1_45_14 GW2011_GWC1_45_14 [LCKI]
Start position on genome 16164
End posion on genome 16092
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggcacagcc
tRNA gene sequence 
GGGACCATAGCTCAGCGGTAGAGCAGGCGACTCATAATCGCTTGGTCGCAGGTTCGAATC
CTGCTGGTCCCACac
Downstream region at tRNA end position 
ttcgactctc
Secondary structure (Cloverleaf model)
>W1511613458	Met	CAT
                   c      ACac ttcgactctc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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