The detailed information of tRNA gene sequence


Sequence ID>W1511613493
Genome IDLCKJ01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWA1_45_15 bacterium GW2011_GWA1_45_15 [LCKJ]
Start position on genome 79193
End posion on genome 79108
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatgaatac
tRNA gene sequence 
GGAGGCGTCGCCTAGTGGTATGGCAGCAGATTGCTAATCTGCGACTCGAAAGAGTCTCGT
GGGTTCGAATCCCACCGTCTCCGCCT
Downstream region at tRNA end position 
gtgttaagat
Secondary structure (Cloverleaf model)
>W1511613493	Ser	GCT
                   c      GCCT gtgttaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C A C C C     A
        G A        C      | | | | |     G
      T     T C C G       G T G G G     C
      G       | | |                 T T
      G     T G G C
        T A        A     GACTCGAAAGAGTCTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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