The detailed information of tRNA gene sequence


Sequence ID>W1511613977
Genome IDLCKX01000018
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_45_39 bacterium GW2011_GWA2_45_39 [LCKX]
Start position on genome 13189
End posion on genome 13101
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacaaaatat
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTAAGGCAAAAGTTTGCTAAACTTTGCTCCCGCAAGGGGGCT
CCTGGGTTCGAATCCCAGCCCTTCCGCCA
Downstream region at tRNA end position 
atgtatggag
Secondary structure (Cloverleaf model)
>W1511613977	Ser	GCT
                   t      GCCA atgtatggag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     GCTCCCGCAAGGGGGCTC
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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