The detailed information of tRNA gene sequence


Sequence ID>W1511613978
Genome IDLCKX01000018
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_45_39 bacterium GW2011_GWA2_45_39 [LCKX]
Start position on genome 13094
End posion on genome 13007
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccaatgtat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGGCGGTCTTGAAAACCGTTGGCCCGCAAGGGTCC
GCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>W1511613978	Ser	TGA
                   t      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGGCCCGCAAGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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