The detailed information of tRNA gene sequence


Sequence ID>W1511614403
Genome IDLCLP01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Pacebacteria bacterium GW2011_GWA1_46_10 bacterium GW2011_GWA1_46_10 [LCLP]
Start position on genome 17346
End posion on genome 17270
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcggcacatt
tRNA gene sequence 
CGGGGAGTAGCTCAGATGGCTAGAGTGCGCGGTTTGGGACCGTGAGGTCGCAGGTTCGAG
TCCTGTCTCCCCGACAA
Downstream region at tRNA end position 
taaattattt
Secondary structure (Cloverleaf model)
>W1511614403	Pro	TGG
                   t      ACAA taaattattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      A G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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