The detailed information of tRNA gene sequence


Sequence ID>W1511615288
Genome IDLCMS01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Uhrbacteria bacterium GW2011_GWE2_46_68 bacterium GW2011_GWE2_46_68 [LCMS]
Start position on genome 38861
End posion on genome 38774
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaacattt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGTCTGGAAAGCGTGTAGGGCGAAAGCTCTC
GCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
gaaatcgaaa
Secondary structure (Cloverleaf model)
>W1511615288	Ser	GGA
                   t      GCCA gaaatcgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGGCGAAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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