The detailed information of tRNA gene sequence


Sequence ID>W1511615646
Genome IDLCNF01000002
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA1_47_10 GW2011_GWA1_47_10 [LCNF]
Start position on genome 51989
End posion on genome 52078
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacgcttatt
tRNA gene sequence 
GGAGACGTGTCAGAGTGGTCTATTGAGCGACTTTGCTAAAGTCGTAGGGCTTAACCGCCC
TCCAGGGTTCGAATCCCTGCGTCTCCGCAA
Downstream region at tRNA end position 
tgacctgcaa
Secondary structure (Cloverleaf model)
>W1511615646	Ser	GCT
                   t      GCAA tgacctgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C T       C A G G G     C
    G       + | | |                 T T
    T       T T G A
      C T A        G     TAGGGCTTAACCGCCCTC
                    C - G
                    G - C
                    A - T
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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