The detailed information of tRNA gene sequence


Sequence ID>W1511616184
Genome IDLCNV01000024
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Amesbacteria bacterium GW2011_GWA1_47_16 bacterium GW2011_GWA1_47_16 [LCNV]
Start position on genome 3148
End posion on genome 3237
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgttttccga
tRNA gene sequence 
GGAGAGGTCGCATAGCGGTCTAGTGCGTACGCTTGGAGAGCGTATGTGGGCGCAAGCTCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCTA
Downstream region at tRNA end position 
atggttattt
Secondary structure (Cloverleaf model)
>W1511616184	Ser	GGA
                   a      GCTA atggttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGGGCGCAAGCTCACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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