The detailed information of tRNA gene sequence


Sequence ID>W1511616231
Genome IDLCNX01000009
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_47_16 GW2011_GWA2_47_16 [LCNX]
Start position on genome 839
End posion on genome 926
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaatagaaga
tRNA gene sequence 
GGAGGGTTCGCATAGCGGTCTAGTGCGCACGCTTGGAAAGCGTGTGTGCCGAAAGGCACC
AAGAGTTCGAATCTCTTACCCTCCGCAA
Downstream region at tRNA end position 
tgaaccgcaa
Secondary structure (Cloverleaf model)
>W1511616231	Ser	GGA
                   a      GCAA tgaaccgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T T C T C     A
      C G A        C      | | | | |     G
    G       T A C G       A A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TGTGCCGAAAGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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