The detailed information of tRNA gene sequence


Sequence ID>W1511616625
Genome IDLCOK01000007
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b bacterium GW2011_GWB1_47_6b [LCOK]
Start position on genome 16983
End posion on genome 16892
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccttattt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGGCAGGTTGCTAACCTGTTATACGGGTTTAAATC
CGTATCGAGAGTTCGAATCTCTCCCTCACCGCat
Downstream region at tRNA end position 
tttacccctt
Secondary structure (Cloverleaf model)
>W1511616625	Ser	GCT
                   t      GCat tttacccctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGTTTAAATCCGTATC
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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