The detailed information of tRNA gene sequence


Sequence ID>W1511616639
Genome IDLCOK01000033
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b bacterium GW2011_GWB1_47_6b [LCOK]
Start position on genome 10310
End posion on genome 10238
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccgcctttat
tRNA gene sequence 
GCCGAGGTAGCTCAATGGCAGAGCAACGGTTTTGTAAACCGTAGGTTGGAGGTTCGACTC
CTCTCCTCGGCTCtt
Downstream region at tRNA end position 
tttatttgaa
Secondary structure (Cloverleaf model)
>W1511616639	Thr	TGT
                   t      TCtt tttatttgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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