The detailed information of tRNA gene sequence


Sequence ID>W1511616771
Genome IDLCOP01000023
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA1_47_8 GW2011_GWA1_47_8 [LCOP]
Start position on genome 1314
End posion on genome 1403
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggaatatatt
tRNA gene sequence 
GGAGATGTGGCTGAGTGGTTGAAGGCAGCGGTTTCGAAAACCGCCGTGCGGGAAACCGTA
CCGTGAGTTCGAATCTCACCATCTCCGCAA
Downstream region at tRNA end position 
ggttgaaagt
Secondary structure (Cloverleaf model)
>W1511616771	Ser	CGA
                   t      GCAA ggttgaaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        A     CGTGCGGGAAACCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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