The detailed information of tRNA gene sequence


Sequence ID>W1511616942
Genome IDLCOW01000025
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA1_47_9 GW2011_GWA1_47_9 [LCOW]
Start position on genome 1854
End posion on genome 1781
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatttgccat
tRNA gene sequence 
GGGGGCATAGTTCAATGGCAGAATGTCGGTCTCCAAAACCGATGATCTAGGTTCGAATCC
TAGTGCCCCCGCCA
Downstream region at tRNA end position 
tggcggtttt
Secondary structure (Cloverleaf model)
>W1511616942	Trp	CCA
                   t      GCCA tggcggtttt
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
        A A        A      | | | | |     G
      T     C T T G       C T A G G     C
      G     | | | +                 T T
      G     G A A T
        C A        G     TGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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