The detailed information of tRNA gene sequence


Sequence ID>W1511617174
Genome IDLCPF01000001
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11 bacterium GW2011_GWA1_48_11 [LCPF]
Start position on genome 248660
End posion on genome 248733
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctcctcgctt
tRNA gene sequence 
GGGCCTATAGTAAAATGGCATTACGCTTCCGTGGCACGGAAGAGGTCGGGGTTCGATTCC
CCGTAGGTCCACCA
Downstream region at tRNA end position 
ggtggaaaat
Secondary structure (Cloverleaf model)
>W1511617174	Ala	GGC
                   t      ACCA ggtggaaaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     G C C C C     A
        A A        A      | | | | |     G
      T     A A T G       C G G G G     C
      G     | | | |                 T T
      G     T T A C
        C A        G     AGGT
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  G       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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