The detailed information of tRNA gene sequence


Sequence ID>W1511617178
Genome IDLCPF01000001
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11 bacterium GW2011_GWA1_48_11 [LCPF]
Start position on genome 292022
End posion on genome 292095
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttttttac
tRNA gene sequence 
CGGGGAGGAGTATGCCGGTAGTACGCACGCTTCGGGTGCGTGTAGACCGGGTTCGATTCC
CGGCTCCCCGACAA
Downstream region at tRNA end position 
tttcaggcat
Secondary structure (Cloverleaf model)
>W1511617178	Pro	CGG
                   c      ACAA tttcaggcat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    G     G G C C C     A
        C G        A      | | | | |     G
      C     T A T G       C C G G G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     TAGA
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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