The detailed information of tRNA gene sequence


Sequence ID>W1511617189
Genome IDLCPF01000001
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11 bacterium GW2011_GWA1_48_11 [LCPF]
Start position on genome 248333
End posion on genome 248246
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acggcgttaa
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTCTAATGCGCCGCACTCGAAATGCGGTTGGGGAGAAATCCCC
TCGGGGGTTCGAATCCTCCACCCTCCGCag
Downstream region at tRNA end position 
ggttgagcgc
Secondary structure (Cloverleaf model)
>W1511617189	Ser	CGA
                   a      GCag ggttgagcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C C T C C     A
      C G A        G      | | + | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C T A        G     TTGGGGAGAAATCCCCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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