The detailed information of tRNA gene sequence


Sequence ID>W1511617331
Genome IDLCPJ01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Gottesmanbacteria bacterium GW2011_GWA1_48_13 bacterium GW2011_GWA1_48_13 [LCPJ]
Start position on genome 21932
End posion on genome 21845
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttcagatt
tRNA gene sequence 
GGAGAGGTCGCATAGAGGCCTAGTGCCACCGCTTGGAAAGCGGTTGGGGGCGTAAGTCCC
ACGCGGGTTCGACTCCCGCCCTCTCCGCag
Downstream region at tRNA end position 
attcaaaatg
Secondary structure (Cloverleaf model)
>W1511617331	Ser	GGA
                   t      GCag attcaaaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        C     TGGGGGCGTAAGTCCCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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