The detailed information of tRNA gene sequence


Sequence ID>W1511617442
Genome IDLCPO01000006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Jorgensenbacteria bacterium GW2011_GWC1_48_8 bacterium GW2011_GWC1_48_8 [LCPO]
Start position on genome 33245
End posion on genome 33160
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatcctattt
tRNA gene sequence 
GGAGGGGTGCAGGAGCGGTTTAACTGGCGGTCCTGGAAAGACCGTATGTCGAAAGGCATC
GAGGGTTCGAATCCCTCCCCCTCCGCtt
Downstream region at tRNA end position 
atgcaagccg
Secondary structure (Cloverleaf model)
>W1511617442	Ser	GGA
                   t      GCtt atgcaagccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G G A C       G A G G G     C
    G         | | |                 T T
    T       A C T G
      T T A        G     TATGTCGAAAGGCATC
                    C - G
                    G - C
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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