The detailed information of tRNA gene sequence


Sequence ID>W1511617515
Genome IDLCPQ01000010
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_48_9 GW2011_GWA2_48_9 [LCPQ]
Start position on genome 100004
End posion on genome 100093
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcccatggc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCGAGTGCGCTTGCTTGGAAAGCAAGTGTCTACGAAAGTGGA
CCGCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tgagcagttc
Secondary structure (Cloverleaf model)
>W1511617515	Ser	GGA
                   c      GCCA tgagcagttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TGTCTACGAAAGTGGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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