The detailed information of tRNA gene sequence


Sequence ID>W1511617846
Genome IDLCQC01000001
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWB1_49_7 GW2011_GWB1_49_7 [LCQC]
Start position on genome 20602
End posion on genome 20515
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttcgccac
tRNA gene sequence 
GGAAGCGTGGCTGAGAGGTCTAAAGCACCGGTTTCGAAAACCGGCAGGGCGCAAGCCCTC
GTGAGTTCGAATCTCACCGCTTCCGCAA
Downstream region at tRNA end position 
tgatttgcta
Secondary structure (Cloverleaf model)
>W1511617846	Ser	CGA
                   c      GCAA tgatttgcta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      A G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         | | |                 T T
    T       A A G C
      C T A        A     CAGGGCGCAAGCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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