The detailed information of tRNA gene sequence


Sequence ID>W1511618032
Genome IDLCQI01000011
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA2_50_10 GW2011_GWA2_50_10 [LCQI]
Start position on genome 1088
End posion on genome 1176
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcatacca
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGACGAATGCACCGGTCTTGAAAACCGGAAGGGTGAATAGCCCT
CGGAGGTTCGAATCCTCCCGCTTCCGCCA
Downstream region at tRNA end position 
tttatcctct
Secondary structure (Cloverleaf model)
>W1511618032	Ser	TGA
                   a      GCCA tttatcctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G A G G     C
    G         | | |                 T T
    A       A T G C
      C G A        A     AAGGGTGAATAGCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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