The detailed information of tRNA gene sequence


Sequence ID>W1511618393
Genome IDLCQX01000014
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWF2_52_12 GW2011_GWF2_52_12 [LCQX]
Start position on genome 7485
End posion on genome 7398
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agagttggct
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCAACGTCCTGCTAAGACGTTAGGGGAGTAATCCCC
TCGAGGGTTCAAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
ttgcgctgtg
Secondary structure (Cloverleaf model)
>W1511618393	Ser	GCT
                   t      GCat ttgcgctgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     TAGGGGAGTAATCCCCTC
                    A - T
                    C - G
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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