The detailed information of tRNA gene sequence


Sequence ID>W1511619085
Genome IDLCRX01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_56_11 bacterium GW2011_GWA2_56_11 [LCRX]
Start position on genome 36460
End posion on genome 36551
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caaaacacac
tRNA gene sequence 
GGAGGAGTACCGAAGCGGTCATAACGGGACGGTCTCGAAAACCGTTTGCCCTCAAAAGGG
GCACGAGGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
aattattcat
Secondary structure (Cloverleaf model)
>W1511619085	Ser	CGA
                   c      GCCA aattattcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGCCCTCAAAAGGGGCAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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