The detailed information of tRNA gene sequence


Sequence ID>W1511619108
Genome IDLCRX01000010
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_56_11 bacterium GW2011_GWA2_56_11 [LCRX]
Start position on genome 31039
End posion on genome 30965
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tccctggcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTGGTAGAGCGCCTCATTTGCAATGAGGTGGTCGGAGGTTCGACTC
CTCTCCGGTCCACTA
Downstream region at tRNA end position 
ggcgcggttt
Secondary structure (Cloverleaf model)
>W1511619108	Ala	TGC
                   a      ACTA ggcgcggttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     T C T C C     A
        G A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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