The detailed information of tRNA gene sequence


Sequence ID>W1511619257
Genome IDLCSC01000014
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWB1_57_6 GW2011_GWB1_57_6 [LCSC]
Start position on genome 12870
End posion on genome 12779
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgcaggcag
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGGCGGGTTGCTAACTCGCTATGCGGATAAAACCG
CATCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gattggcaac
Secondary structure (Cloverleaf model)
>W1511619257	Ser	GCT
                   g      GCCA gattggcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATGCGGATAAAACCGCATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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