The detailed information of tRNA gene sequence


Sequence ID>W1511619289
Genome IDLCSE01000018
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWA1_59_11 GW2011_GWA1_59_11 [LCSE]
Start position on genome 9150
End posion on genome 9240
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgggtgcaa
tRNA gene sequence 
GGAGGGGTGCGTGAGCGGTTCAAACGAGCGGCTTGCTAAGCCGTGACGGCTTTAAAACCG
TCCGTGGGTTCGAATCCCACCCCCTCCGCAA
Downstream region at tRNA end position 
tagatttttc
Secondary structure (Cloverleaf model)
>W1511619289	Ser	GCT
                   a      GCAA tagatttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T G C       G T G G G     C
    G         | | |                 T T
    T       A A C G
      T C A        A     GACGGCTTTAAAACCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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