The detailed information of tRNA gene sequence


Sequence ID>W11150224
Genome IDAEVM01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylocystis sp. ATCC 49242 [AEVM]
Start position on genome 5845
End posion on genome 5769
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcgccgcgc
tRNA gene sequence 
GGGGGAGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCTCTCTCGCCA
Downstream region at tRNA end position 
tataattcaa
Secondary structure (Cloverleaf model)
>W11150224	Asp	GTC
                   c      GCCA tataattcaa
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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