The detailed information of tRNA gene sequence


Sequence ID>W1511657154
Genome IDLELB01000116
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis LF-89 = ATCC VR-1361 [LELB]
Start position on genome 4257
End posion on genome 4332
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accatgtcct
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
ttttcccatg
Secondary structure (Cloverleaf model)
>W1511657154	Glu	TTC
                   t      GCCA ttttcccatg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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